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from pathlib import Path
import onnx import onnx.helper as onnx_helper import onnx.numpy_helper as onnx_numpy_helper
from .quant_utils import attribute_to_kwarg, find_by_name
def _clean_initializers_helper(graph, model): """Clean unused initializers from graph.
Returns: A cleaned graph without unused initializers A list of tensor names, which are not produced by this graph and its subgraphes """
requesting_tensor_names = set() requesting_tensor_names.update(input_name for node in graph.node for input_name in node.input if input_name) requesting_tensor_names.update(g_out.name for g_out in graph.output if g_out.name)
new_nodes = [] for node in graph.node: new_node = node graph_attrs = [ attr for attr in node.attribute if attr.type == onnx.AttributeProto.GRAPH or attr.type == onnx.AttributeProto.GRAPHS ] if graph_attrs: kwargs = {} for attr in node.attribute: new_attribute = {} if attr.type == onnx.AttributeProto.GRAPH: ( cleaned_sub_graph, sub_requesting_tensor_names, ) = _clean_initializers_helper(attr.g, model) new_attribute = {attr.name: cleaned_sub_graph} requesting_tensor_names.update(sub_requesting_tensor_names) elif attr.type == onnx.AttributeProto.GRAPHS: cleaned_graphes = [] for subgraph in attr.graphs: ( cleaned_sub_graph, sub_requesting_tensor_names, ) = _clean_initializers_helper(subgraph, model) cleaned_graphes.append(cleaned_sub_graph) requesting_tensor_names.update(sub_requesting_tensor_names) new_attribute = {attr.name: cleaned_graphes} else: new_attribute = attribute_to_kwarg(attr) kwargs.update(new_attribute) new_node = onnx_helper.make_node(node.op_type, node.input, node.output, name=node.name, **kwargs) new_nodes.append(new_node)
graph.ClearField("node") graph.node.extend(new_nodes)
requesting_tensor_names.difference_update(output for node in graph.node for output in node.output)
unused_initializer = [] for initializer in graph.initializer: if initializer.name in requesting_tensor_names: requesting_tensor_names.remove(initializer.name) else: # mark it to remove, remove here directly will cause mis-behavier unused_initializer.append(initializer)
name_to_input = {input.name: input for input in graph.input} for initializer in unused_initializer: graph.initializer.remove(initializer) if initializer.name in name_to_input: try: graph.input.remove(name_to_input[initializer.name]) except StopIteration: if model.ir_version < 4: print( "Warning: invalid weight name {} found in the graph (not a graph input)".format( initializer.name ) )
requesting_tensor_names.difference_update(input.name for input in graph.input)
return graph, requesting_tensor_names
class ONNXModel: def __init__(self, model): self.model = model
def nodes(self): return self.model.graph.node
def initializer(self): return self.model.graph.initializer
def graph(self): return self.model.graph
def ir_version(self): return self.model.ir_version
def opset_import(self): return self.model.opset_import
def remove_node(self, node): if node in self.model.graph.node: self.model.graph.node.remove(node)
def remove_nodes(self, nodes_to_remove): for node in nodes_to_remove: self.remove_node(node)
def add_node(self, node): self.model.graph.node.extend([node])
def add_nodes(self, nodes_to_add): self.model.graph.node.extend(nodes_to_add)
def add_initializer(self, tensor): if find_by_name(tensor.name, self.model.graph.initializer) is None: self.model.graph.initializer.extend([tensor])
def get_initializer(self, name): for tensor in self.model.graph.initializer: if tensor.name == name: return tensor return None
def get_initializer_name_set(self): return set(initializer.name for initializer in self.model.graph.initializer)
def remove_initializer(self, tensor): if tensor in self.model.graph.initializer: self.model.graph.initializer.remove(tensor) for input in self.model.graph.input: if input.name == tensor.name: self.model.graph.input.remove(input) break
def remove_initializers(self, init_to_remove): for initializer in init_to_remove: self.remove_initializer(initializer)
def get_non_initializer_inputs(self): initializer_names = self.get_initializer_name_set() non_initializer_inputs = set() for input in self.model.graph.input: if input.name not in initializer_names: non_initializer_inputs.add(input.name) return non_initializer_inputs
def input_name_to_nodes(self): input_name_to_nodes = {} for node in self.model.graph.node: for input_name in node.input: if input_name not in input_name_to_nodes: input_name_to_nodes[input_name] = [node] else: input_name_to_nodes[input_name].append(node) return input_name_to_nodes
def output_name_to_node(self): output_name_to_node = {} for node in self.model.graph.node: for output_name in node.output: output_name_to_node[output_name] = node return output_name_to_node
def get_children(self, node, input_name_to_nodes=None): if input_name_to_nodes is None: input_name_to_nodes = self.input_name_to_nodes()
children = [] for output in node.output: if output in input_name_to_nodes: for node in input_name_to_nodes[output]: children.append(node) return children
def get_parents(self, node, output_name_to_node=None): if output_name_to_node is None: output_name_to_node = self.output_name_to_node()
parents = [] for input in node.input: if input in output_name_to_node: parents.append(output_name_to_node[input]) return parents
def get_parent(self, node, idx, output_name_to_node=None): if output_name_to_node is None: output_name_to_node = self.output_name_to_node()
if len(node.input) <= idx: return None
input = node.input[idx] if input not in output_name_to_node: return None
return output_name_to_node[input]
def find_node_by_name(self, node_name, new_nodes_list, graph): """Find out if a node exists in a graph or a node is in the
new set of nodes created during quantization.
Returns: The node found or None. """
graph_nodes_list = list(graph.node) # deep copy graph_nodes_list.extend(new_nodes_list) node = find_by_name(node_name, graph_nodes_list) return node
def find_nodes_by_initializer(self, graph, initializer): """
Find all nodes with given initializer as an input. """
nodes = [] for node in graph.node: for node_input in node.input: if node_input == initializer.name: nodes.append(node) return nodes
@staticmethod def __get_initializer(name, graph_path): for gid in range(len(graph_path) - 1, -1, -1): graph = graph_path[gid] for tensor in graph.initializer: if tensor.name == name: return tensor, graph return None, None
@staticmethod def __replace_gemm_with_matmul(graph_path): new_nodes = [] graph = graph_path[-1] for node in graph.node: graph_attrs = [attr for attr in node.attribute if attr.type == 5 or attr.type == 10] if len(graph_attrs): kwargs = {} for attr in node.attribute: if attr.type == 5: graph_path.append(attr.g) kv = {attr.name: ONNXModel.__replace_gemm_with_matmul(graph_path)} elif attr.type == 10: value = [] for subgraph in attr.graphs: graph_path.append(subgraph) value.extend([ONNXModel.__replace_gemm_with_matmul(graph_path)]) kv = {attr.name: value} else: kv = attribute_to_kwarg(attr) kwargs.update(kv) node = onnx_helper.make_node(node.op_type, node.input, node.output, name=node.name, **kwargs)
if node.op_type == "Gemm": alpha = 1.0 beta = 1.0 transA = 0 transB = 0 for attr in node.attribute: if attr.name == "alpha": alpha = onnx_helper.get_attribute_value(attr) elif attr.name == "beta": beta = onnx_helper.get_attribute_value(attr) elif attr.name == "transA": transA = onnx_helper.get_attribute_value(attr) elif attr.name == "transB": transB = onnx_helper.get_attribute_value(attr) if alpha == 1.0 and beta == 1.0 and transA == 0: inputB = node.input[1] if transB == 1: B, Bs_graph = ONNXModel.__get_initializer(node.input[1], graph_path) if B: # assume B is not used by any other node B_array = onnx_numpy_helper.to_array(B) B_trans = onnx_numpy_helper.from_array(B_array.T) B_trans.name = B.name Bs_graph.initializer.remove(B) for input in Bs_graph.input: if input.name == inputB: Bs_graph.input.remove(input) break Bs_graph.initializer.extend([B_trans]) else: inputB += "_Transposed" transpose_node = onnx_helper.make_node( "Transpose", inputs=[node.input[1]], outputs=[inputB], name=node.name + "_Transpose" if node.name != "" else "", ) new_nodes.append(transpose_node)
matmul_node = onnx_helper.make_node( "MatMul", inputs=[node.input[0], inputB], outputs=[node.output[0] + ("_MatMul" if len(node.input) > 2 else "")], name=node.name + "_MatMul" if node.name != "" else "", ) new_nodes.append(matmul_node)
if len(node.input) > 2: add_node = onnx_helper.make_node( "Add", inputs=[node.output[0] + "_MatMul", node.input[2]], outputs=node.output, name=node.name + "_Add" if node.name != "" else "", ) new_nodes.append(add_node)
# unsupported else: new_nodes.append(node)
# not GEMM else: new_nodes.append(node)
graph.ClearField("node") graph.node.extend(new_nodes) graph_path.pop() return graph
def replace_gemm_with_matmul(self): graph_path = [self.graph()] ONNXModel.__replace_gemm_with_matmul(graph_path)
def save_model_to_file(self, output_path, use_external_data_format=False): """
Save model to external data, which is needed for model size > 2GB """
self.topological_sort() if use_external_data_format: onnx.external_data_helper.convert_model_to_external_data( self.model, all_tensors_to_one_file=True, location=Path(output_path).name + ".data", ) onnx.save_model(self.model, output_path)
@staticmethod def replace_node_input(node, old_input_name, new_input_name): assert isinstance(old_input_name, str) and isinstance(new_input_name, str) for j in range(len(node.input)): if node.input[j] == old_input_name: node.input[j] = new_input_name
def replace_input_of_all_nodes(self, old_input_name, new_input_name): for node in self.model.graph.node: ONNXModel.replace_node_input(node, old_input_name, new_input_name)
@staticmethod def replace_node_output(node, old_output_name, new_output_name): assert isinstance(old_output_name, str) and isinstance(new_output_name, str) for j in range(len(node.output)): if node.output[j] == old_output_name: node.output[j] = new_output_name
def replace_output_of_all_nodes(self, old_output_name, new_output_name): for node in self.model.graph.node: ONNXModel.replace_node_output(node, old_output_name, new_output_name)
def remove_unused_constant(self): input_name_to_nodes = self.input_name_to_nodes()
# remove unused constant unused_nodes = [] nodes = self.nodes() for node in nodes: if ( node.op_type == "Constant" and not self.is_graph_output(node.output[0]) and node.output[0] not in input_name_to_nodes ): unused_nodes.append(node)
self.remove_nodes(unused_nodes)
ununsed_weights = [] for w in self.initializer(): if w.name not in input_name_to_nodes and not self.is_graph_output(w.name): ununsed_weights.append(w) # Remove from graph.input for graph_input in self.graph().input: if graph_input.name == w.name: self.graph().input.remove(graph_input)
self.remove_initializers(ununsed_weights)
def is_graph_output(self, output_name): for output in self.model.graph.output: if output.name == output_name: return True return False
def is_graph_input(self, tensor_name: str) -> bool: for input in self.model.graph.input: if input.name == tensor_name: return True return False
# TODO:use OnnxModel.graph_topological_sort(self.model.graph) from transformers.onnx_model # Currently it breaks Openvino/Linux training gpu pipeline so hold off for 1.8 release def topological_sort(self): deps_count = [0] * len(self.nodes()) # dependency count of each node deps_to_nodes = {} # input to node indice sorted_nodes = [] # initialize sorted_nodes for node_idx, node in enumerate(self.nodes()): # CANNOT use len(node.input) directly because input can be optional deps_count[node_idx] = sum(1 for _ in node.input if _) if deps_count[node_idx] == 0: # Constant doesn't depend on any inputs sorted_nodes.append(self.nodes()[node_idx]) continue
for input_name in node.input: if input_name not in deps_to_nodes: deps_to_nodes[input_name] = [node_idx] else: deps_to_nodes[input_name].append(node_idx)
initializer_names = [init.name for init in self.initializer()] graph_input_names = [input.name for input in self.model.graph.input] input_names = initializer_names + graph_input_names input_names.sort() prev_input_name = None for input_name in input_names: if prev_input_name == input_name: continue
prev_input_name = input_name if input_name in deps_to_nodes: for node_idx in deps_to_nodes[input_name]: deps_count[node_idx] = deps_count[node_idx] - 1 if deps_count[node_idx] == 0: sorted_nodes.append(self.nodes()[node_idx])
start = 0 end = len(sorted_nodes)
while start < end: for output in sorted_nodes[start].output: if output in deps_to_nodes: for node_idx in deps_to_nodes[output]: deps_count[node_idx] = deps_count[node_idx] - 1 if deps_count[node_idx] == 0: sorted_nodes.append(self.nodes()[node_idx]) end = end + 1 start = start + 1
assert end == len(self.graph().node), "Graph is not a DAG" self.graph().ClearField("node") self.graph().node.extend(sorted_nodes)
def clean_initializers(self): return _clean_initializers_helper(self.graph(), self.model)
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